SubtiBank SubtiBank
Version comparison:

2018-11-01 15:31:562025-08-16 07:53:08

locus

BSU18660

BSU_18660

geneLength

681

684

ec

outlinks

bsu

BSU18660

BSU_18660

Gene

Coordinates

2,036,039 → 2,036,722

2,036,039 2,036,722

The protein

Protein family

polysaccharide lyase 1 family (according to Swiss-Prot)

[SW|SOS response-associated peptidase family] (according to UniProt)

The protein

[SW|Localization]

secreted (according to Swiss-Prot)

Biological materials

Mutant

MGNA-A841 (yoaM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/841 NBRP B. subtilis, Japan]

BKE18660 (Δ[[gene|yoaM]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCCATCATCCTTTTTA, downstream forward: _UP4_TAGTGATTGAAAAAATTCTC

BKK18660 (Δ[[gene|yoaM]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCCATCATCCTTTTTA, downstream forward: _UP4_TAGTGATTGAAAAAATTCTC

MGNA-A841 (yoaM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/841 NBRP B. subtilis, Japan]

BKE18660 ([[gene|yoaM]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCCATCATCCTTTTTA, downstream forward: _UP4_TAGTGATTGAAAAAATTCTC

BKK18660 ([[gene|yoaM]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCCATCATCCTTTTTA, downstream forward: _UP4_TAGTGATTGAAAAAATTCTC

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|5KO9] (human protein, 29% identity)